Read ROIs from a GeoJSON file — at_read_geojson • annotatR

Read ROIs from a GeoJSON file

Usage

at_read_geojson(
  path,
  layer_name = NULL,
  level = 0L,
  flip_y = FALSE,
  height = NULL,
  call = rlang::caller_env()
)

Arguments

path: Path to a GeoJSON file.
layer_name: Layer name for the imported ROIs; taken from the features' layer property when NULL.
level: Integer level to record when a feature has no level property.
flip_y: Logical; invert the y-axis on read. Default FALSE.
height: Image height in pixels, required when flip_y = TRUE.
call: The calling environment, for error reporting.

Value

A named list of annot_layer objects (one per distinct layer property), or a single annot_layer when layer_name is supplied.

See also

Other io: at_load_project(), at_load_session(), at_read_qupath(), at_read_rois_csv(), at_roi_from_geojson(), at_save_project(), at_save_session(), at_write_geojson(), at_write_qupath(), at_write_rois_csv()