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Quick-look plots for a parsed qview object.

Usage

# S3 method for class 'qview'
plot(x, type = c("plate_map", "intensity_heatmap", "replicate_scatter"), ...)

Arguments

x

A qview object returned by read_qview().

type

One of "plate_map", "intensity_heatmap", "replicate_scatter". Default "plate_map".

...

Unused; for S3 generic compatibility.

Value

A ggplot object.

Details

  • "plate_map" – heat-coloured plate map, one cell per well, fill by well type (standard / negative / sample / control).

  • "intensity_heatmap" – per-analyte facet, fill by replicate-1 pixel intensity per well.

  • "replicate_scatter" – replicate 1 vs replicate 2 pixel intensity per analyte.

Requires the ggplot2 package (Suggested).

See also