Converts a single session's DICOM files to NIfTI format using dcm2niix.
Usage
convert_dcm2niix(dicom_dir, output_dir, compress = TRUE, verbose = TRUE)
Arguments
- dicom_dir
Character. Path to session DICOM directory.
- output_dir
Character. Path for NIfTI output.
- compress
Logical. Gzip output. Default TRUE.
- verbose
Logical. Print progress. Default TRUE.
Value
Character vector of output NIfTI paths.
Examples
if (FALSE) { # \dontrun{
convert_dcm2niix("data/raw/dicom/SCI001/ses-01", "data/nifti/SCI001/ses-01")
} # }
