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Scans the project directory and reports which processing steps are complete for each patient and session.

Usage

sci_pipeline_status(project_dir)

Arguments

project_dir

Character. Path to workflowr project root.

Value

Tibble with columns: pat_id, session, converted, sc_seg, lesion_seg, vert_labels, qc_done, params_extracted.

Examples

if (FALSE) { # \dontrun{
sci_pipeline_status("~/projects/my-sci-study")
} # }