Runs sct_analyze_lesion to compute lesion volume, length, max axial
damage ratio, and tissue bridge measurements.
Usage
sct_analyze_lesion(lesion_seg, sc_seg, output_dir = NULL, verbose = TRUE)
Arguments
- lesion_seg
Character. Path to lesion segmentation NIfTI.
- sc_seg
Character. Path to spinal cord segmentation NIfTI.
- output_dir
Character. Directory for CSV output.
- verbose
Logical. Print progress. Default TRUE.
Value
Character. Path to output CSV, or NA on failure.
Examples
if (FALSE) { # \dontrun{
sct_analyze_lesion("sub-01_lesion_seg.nii.gz", "sub-01_seg.nii.gz")
} # }
