QC Summary

Returns a summary data.frame of QC metrics.

Usage

bb_qc_summary(qc_object)

Arguments

qc_object

A bb_qc object from bb_qc().

Value

A data.frame with one row per file.

Examples

# \donttest{
tmp <- tempfile(fileext = ".fastq")
writeLines(c("@r1", "ACGT", "+", "IIII"), tmp)
qc <- bb_qc(fastq_path = tmp)
bb_qc_summary(qc)
#>                     file total_reads median_gc mapping_rate
#> 1 file32934c8fad87.fastq           1       0.5           NA
# }