Compute AUC with confidence interval from a cr_result — cr_auc • cellreportR

Compute AUC with confidence interval from a cr_result

Usage

cr_auc(result, ci_method = c("delong", "bootstrap"), n_boot = 1000)

Arguments

result: A cr_result from cr_logistic().
ci_method: "delong" (default) or "bootstrap".
n_boot: Number of bootstrap resamples for "bootstrap".

Value

A tibble with auc, ci_low, ci_high, method.

Examples

exp <- cr_example_experiment(seed = 1, n_cells_per_well = 30)
res <- cr_logistic(exp, "marker_1", "CompoundA_high", "Untreated")
cr_auc(res)
#> # A tibble: 1 × 4
#>     auc ci_low ci_high method
#>   <dbl>  <dbl>   <dbl> <chr> 
#> 1 0.982  0.974   0.989 delong