Read Nexus clinical data

Parse a clinical data export (CSV format) from a clinical information system such as Nexus.

Usage

mp_read_nexus_clinical(path_or_connection)

Arguments

path_or_connection

Character scalar. Path to the CSV file, or an open connection.

Value

A molpath_parsed object whose data slot is a tibble with columns patient_id, parameter, value, unit, date, and source.

Examples

# \donttest{
clin_file <- system.file("extdata", "nexus_clinical.csv",
                         package = "molpathR")
if (nzchar(clin_file)) {
  result <- mp_read_nexus_clinical(clin_file)
  print(result)
}
# }