Read survival / outcome data

Read a survival data file in Excel or CSV format and standardise the column names to a canonical schema.

Usage

mp_read_survival(path)

Arguments

path

Character scalar. Path to a .xlsx, .xls, or .csv file.

Value

A molpath_parsed object whose data slot is a tibble with columns patient_id, os_months, os_status, pfs_months, and pfs_status.

Examples

# \donttest{
surv_file <- system.file("extdata", "survival.csv", package = "molpathR")
if (nzchar(surv_file)) {
  result <- mp_read_survival(surv_file)
  print(result)
}
# }