Summarise QC steps applied to an experiment

Summarise QC steps applied to an experiment

Usage

cr_qc_summary(experiment)

Arguments

experiment

A cr_experiment.

Value

A tibble with one row per QC step.

Examples

exp <- cr_example_experiment(seed = 1, n_cells_per_well = 30)
exp <- cr_qc_filter(exp, min_area = 50)
cr_qc_summary(exp)
#> # A tibble: 1 × 7
#>   step         parameters cells_before cells_after cells_removed percent_removed
#>   <chr>        <chr>             <int>       <int>         <int>           <dbl>
#> 1 cr_qc_filter min_area=…         2911        2754           157            5.39
#> # ℹ 1 more variable: timestamp <dttm>