Export results to CSV, Excel or RDS

Writes a single flat table of results. Anything the reporting layer produces is accepted: a cr_report, a cr_result, the list returned by cr_test_all(), a named list of tables, or a plain data frame.

Usage

cr_export_results(results, path, format = NULL)

Arguments

results

A cr_report, a cr_result, a list of cr_result objects, a named list of data frames, or a data frame.

path

Output file path. The extension determines the format unless format is given.

format

One of "csv", "xlsx", "rds". NULL (default) infers it from the extension of path, falling back to "csv".

Value

The output path (invisibly).

See also

cr_export_tables() to write several tables at once and cr_macros() to emit individual numbers.

Other reporting: cr_export_plots(), cr_export_tables(), cr_render_report(), cr_report(), cr_table_qc(), cr_tables()

Examples

exp <- cr_example_experiment(seed = 1, n_cells_per_well = 20)
rep <- cr_report(exp)
f <- tempfile(fileext = ".csv")
cr_export_results(rep$tables$disposition, f)
utils::read.csv(f)
#>        treatment n_units n_cells median_cells_per_unit
#> 1 CompoundA_high      16     324                  20.5
#> 2  CompoundA_low      16     341                  21.0
#> 3      CompoundB      16     350                  23.0
#> 4      CompoundC      16     335                  20.0
#> 5     PosControl      16     303                  19.0
#> 6      Untreated      16     308                  19.0
#> 7        (total)      96    1961                  20.0