Package index • dynasimR

Data I/O

Load, validate and inspect simulation outputs.

read_simulation(): Load simulation outputs into the dynasimR standard format
load_example_data(): Load the package-bundled example dataset
validate_dynasimR_data(): Validate a dynasimR_data object
scenario_meta: Scenario metadata for Profile A and Profile B
survival_params: Example Weibull event-time parameters by priority category

Time-to-event analysis

Kaplan-Meier, Cox regression and associated plots.

km_estimate(): Kaplan-Meier estimator for simulation data
cox_model(): Cox proportional-hazards model for simulation data
plot_km(): Kaplan-Meier curves
plot_forest(): Forest plot of Cox hazard ratios

Policy effects

Policy A vs. Policy B quantification.

policy_effect(): Quantify policy effect (policy A vs. policy B)
plot_policy(): Policy effect bar chart with CI whiskers

Autonomy trade-off

AL0-AL5 event-vs-compliance analysis.

al_efficiency(): Compute AL-Efficiency ratio (event reduction vs. compliance)
plot_al_tradeoff(): Autonomy-level trade-off plot: event reduction vs. compliance
plot_radar(): Radar chart of metrics across scenarios

Compliance / Entity flow

Compliance Index, throughput, bottlenecks.

compute_compliance_index(): Compliance Index
stage_throughput(): Stage throughput analysis
detect_bottlenecks(): Bottleneck detection across processing stages
resource_comparison(): Compare outcomes across resource configurations

Sensitivity analysis

morris_screening(): Morris-style sensitivity screening from simulation replicates
tornado_data(): Tornado-diagram data from one-at-a-time perturbation

Profile B helpers

progress_trajectory(): Progress-score trajectory analysis (Profile B)
compute_wait_gap_index(): Wait-Gap Index (Profile B)
group_effect(): Between-group prioritisation effect (Profile B)
compute_completion_analysis(): Completion-outcome analysis (multinomial)
spatial_supply_demand(): Supply-Demand Index (SDI) per region
plot_progress_curves(): Progress-score trajectory plot (Profile B)
plot_sdi_map(): Supply-Demand Index choropleth
plot_cost_effectiveness(): Cost-effectiveness plane and CEAC curve

Visualisation

plot_map(): 2D entity map snapshot
plot_scenario_heatmap(): Scenario comparison heatmap
plot_timeline(): Time-series plot of a simulation metric
theme_dynasimR(): ggplot2 theme for dynasimR figures
dynasimR_colors(): Colour palette for dynasimR plots
scale_color_group_dynasimR(): Colour scale for entity group
scale_fill_group_dynasimR(): Fill scale for entity group
scale_color_policy_dynasimR(): Colour scale for policy

Manuscript export

export_figure(): Export a ggplot in publication-ready format
export_latex_table(): Export a tibble as a publication-quality LaTeX table
fill_placeholders(): Fill [XX_*] placeholders in a LaTeX manuscript

Shiny dashboard

launch_app(): Launch the dynasimR Shiny dashboard
check_app_dependencies(): Check availability of Shiny-app dependencies