Fold-change forest plot

Fold-change forest plot

Usage

cr_plot_foldchange(result)

Arguments

result

A cr_result, a list of cr_results (from cr_test_all()), or a precomputed data frame with columns treatment, median_log2_fc.

Value

A ggplot object.

See also

cr_plot_forest() for effect sizes with confidence intervals.

Other visualisation: cr_plot_comparison(), cr_plot_dose_response(), cr_plot_effect_sizes(), cr_plot_heatmap(), cr_plot_histogram(), cr_plot_intensity(), cr_plot_plate(), cr_plot_qc(), cr_plot_roc(), cr_plot_scatter(), cr_plot_spatial(), cr_plot_timeline()

Examples

# \donttest{
exp <- cr_example_experiment(seed = 1, n_cells_per_well = 20)
res <- cr_test_all(exp, "marker_1", "Untreated", level = "replicate")
cr_plot_foldchange(res)

# }